Category

Genome Annotation


Usage

gemini load -v my.vcf -t snpEff my.db


Manual

-o mean. Compute the average of the values. They must be numeric.
-o median. Compute the median of the values. They must be numeric.
-o min. Compute the minimum of the values. They must be numeric.
-o max. Compute the maximum of the values. They must be numeric.
-o mode. Compute the maximum of the values. They must be numeric.
-o first. Use the value from the first record in the annotation file.
-o last. Use the value from the last record in the annotation file.
-o list. Create a comma-separated list of the observed values. -t must be text
-o uniq_list. Create a comma-separated list of the distinct (i.e., non-redundant) observed values. -t must be text
-o sum. Compute the sum of the values. They must be numeric.


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