Category

Align


Usage

tblastx -query input_reads.fasta -db input_reads_db -out blastn_output.alignments [options]


Manual

input_reads.fasta is an input file of sequence data in fasta format, input_reads_db is the generated BLAST database, and blastn_output.alignments is the output file where the alignments are stored. Additional parameters can be found in the BLAST manual: http://www.ncbi.nlm.nih.gov/books/NBK1763/, or by typing:

tblastx -help


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